Lemon Cupcakes with Blackberry Cream Cheese Frosting

Also try my lemon blueberry cake!

lemon cupcakes with blackberry cream cheese frosting
lemon cupcakes with blackberry cream cheese frosting topped with blackberries on a white serving plate

We have lemon cupcakes with blackberry cream cheese frosting on today’s menu. These cupcakes are all sorts of flavorful with a giant dose of naturally colored (yay!) and naturally flavored (yay again!) blackberry frosting. They’re your dessert answer for everything coming up:

  • Literally any springtime celebration = these cupcakes.
  • Lilac/lavendar wedding color scheme? Done.
  • Bridal shower? Obviously.
  • Baby shower? This is your dessert, totally gender neutral.
  • Mother’s Day or Father’s Day celebration? Parent approved.
  • No reason at all? Do you even need a reason to make cupcakes?

In terms of flavors, they remind me of my lemon berry yogurt cake and citrus cake

lemon cupcake batter in a cupcake pan
lemon cupcakes

This is my basic recipe for lemon cupcakes, which I also use for lemon raspberry cupcakes. They’re soft and fluffy with bright and sunny lemon flavor. I published the recipe 4 years ago and they’ve never steered us wrong! The recipe is actually my most popular cake recipe on my blog: lemon blueberry cake… only reduced to make cupcakes. So if you’ve tried the lemon blueberry layer cake recipe, you know the cupcake version is a winner too.

There’s nothing crazy or fancy about the batter. Simply creamed butter + sugar, eggs, flour, baking powder, milk, and lemon. The usual gang! The batter is creamy, silky, and has the most unbelievable fresh lemon fragrance. You’ll fall in love even before you steal the first taste.

Remember to only fill your cupcake liners 2/3 full—just like you see above.

Grab fresh blackberries, puree them in a food processor (I use my little ninja!), then push through a fine mesh strainer to rid the seeds. You’re left with thick and seedless blackberry juice, which will go directly into the frosting. I suppose a blackberry jam works just as well, though the flavor may not be as potent.

2 images of pureed blackberries in a food processor and blackberry puree in a mesh sieve
blackberry cream cheese frosting in a glass bowl

(Don’t you just want to swipe a taste with your finger???)

I don’t suggest doing this method with any other berry—though raspberries *should* be fine. Strawberries and blueberries produce a juice that’s much too thin for cream cheese frosting. You know what to do instead? Freeze-dried berries. You know I swear by freeze-dried berries for this strawberry buttercream frosting.

#1 Issue with Cream Cheese Frosting

This is a cream cheese frosting variation so make sure you’re using brick cream cheese, not cream cheese spread. That’s the #1 issue readers face when making cream cheese frosting. You want the actual brick of cream cheese, sold right next to the tubs of cream cheese spread.

The blackberry flavor in this frosting is mild, but you’ll know it’s there. The blackberry cream cheese frosting is a little thinner than we’re used to because of the added juice, but I was still able to pipe it with my #12 round tip. I actually loved how light it was, especially paired with an equally light lemon cupcake. The frosting is also super soft and just as creamy as you see in the photo above.

lemon cupcakes with blackberry cream cheese frosting

Baker’s Tip: Try filling these cupcakes with my homemade lemon curd for an extra special treat! See my How to Fill Cupcakes tutorial and video for exactly how to do so. (Use method #2 outlined in that post for filling.)

This is, without a doubt, my new favorite cream cheese frosting. I’m already planning on using it as an alternate filling in this strawberries and cream cake roll and urge you to try that too! Also, doesn’t looking at the purple color instantly put you in a better mood? Experience it all ASAP. ↓

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lemon cupcakes with blackberry cream cheese frosting

Lemon Cupcakes with Blackberry Cream Cheese Frosting

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.6 from 40 reviews
  • Author: Sally McKenney
  • Prep Time: 25 minutes
  • Cook Time: 22 minutes
  • Total Time: 3 hours
  • Yield: 12 cupcakes
  • Category: Cupcakes
  • Method: Baking
  • Cuisine: American
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Description

These lemon cupcakes are soft, fluffy, and exploding with lemon flavor. Topped with fresh blackberry cream cheese frosting for the ultimate treat!


Ingredients

  • 1 and 1/2 cups (188g) all-purpose flour (spooned & leveled)
  • 2 teaspoons baking powder
  • 1/2 teaspoon salt
  • 1/2 cup (8 Tbsp; 113g) unsalted butter, softened to room temperature
  • 1 cup (200g) granulated sugar
  • 2 large eggs, at room temperature
  • 1 and 1/2 teaspoons pure vanilla extract
  • 1/2 cup (120ml) milk*
  • zest + fresh juice of two medium lemons*

Blackberry Cream Cheese Frosting

  • 1 cup fresh blackberries, divided*
  • 8 ounces (226g) full-fat brick cream cheese, softened to room temperature
  • 1/4 cup (4 Tbsp; 56g) unsalted butter, softened to room temperature
  • 3 cups (360g) confectioners’ sugar
  • 1 teaspoon pure vanilla extract
  • 1/8 teaspoon salt


Instructions

  1. Preheat the oven to 350°F (177°C). Line a 12-count muffin pan with cupcake liners.
  2. Make the cupcakes: Whisk the flour, baking powder, and salt together. Set aside.
  3. Using a handheld or stand mixer fitted with a paddle attachment, beat the butter and sugar together on high speed until smooth and creamy, about 2 minutes. Scrape down the sides and up the bottom of the bowl with a rubber spatula as needed. Add the eggs and vanilla, then beat on medium-high speed until combined. Scrape down the sides and up the bottom of the bowl as needed. With the mixer on low speed, add the dry ingredients until just incorporated. With the mixer still running on low, slowly pour in the milk, lemon juice, and zest until combined. Do not overmix. You may need to whisk it all by hand to make sure there are no lumps at the bottom of the bowl. The batter will be slightly thick.
  4. Pour/spoon the batter into the liners—fill only 2/3 full to avoid spilling over the sides. Bake for 18-22 minutes, or until a toothpick inserted in the center comes out clean. For around 30 mini cupcakes, bake for about 11-13 minutes, same oven temperature. Allow the cupcakes to cool completely before frosting.
  5. Make the frosting: Puree 1/2 cup—2/3 cup blackberries in a small food processor. Push through a fine mesh strainer to rid the seeds. You’ll have a couple Tablespoons of puree.
  6. In a large bowl using a handheld or stand mixer fitted with a paddle or whisk attachment, beat the cream cheese and butter together on high speed until smooth and creamy. Add confectioners’ sugar, vanilla, blackberry puree, and salt. Beat on low speed for 30 seconds, then switch to high speed and beat for 2 minutes.
  7. Frost cooled cupcakes. I used Wilton #12 round tip. Garnish with remaining berries.

Notes

  1. Make Ahead Instructions: Store leftovers in the refrigerator for up to 4-5 days. Plain cupcakes can be made ahead 1 day in advance, covered, and stored at room temperature. Frosting can also be made 1 day in advance, covered, and stored in the refrigerator until ready to use. Frosted or unfrosted cupcakes can be frozen up to 2-3 months. Thaw overnight in the refrigerator.
  2. Special Tools (affiliate links): 12-count Muffin Pan | Cupcake Liners | Glass Mixing Bowls | Whisk | Electric Mixer (Handheld or Stand) | Food Processor or Blender | Wilton #12 Round Decorating Tip | Piping Bag (Reusable or Disposable)
  3. Milk: I suggest whole milk or buttermilk. Any milk is fine, but you’ll get the most wonderful moist, soft, and rich texture with either of those 2.
  4. Lemons: About 1 and 1/2 Tbsp zest and 1/4—1/3 cup lemon juice.
  5. Blackberries: I don’t suggest using frozen blackberries, nor do I suggest any other berry. Raspberries *might* work, but strawberry and blueberry puree will be much too thin. Instead, use freeze-dried strawberries or blueberries like we do in strawberry buttercream frosting.
sally mckenney headshot purple shirt.
About the Author

Sally McKenney

Sally McKenney is a baker, food photographer, and New York Times best-selling author. Her kitchen-tested recipes and step-by-step tutorials have given millions of readers the knowledge and confidence to bake from scratch. Sally’s work has been featured on TODAY, Good Morning America, Taste of Home, People, and more.

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Reader Comments and Reviews

  1. Paula Papineau says:
    April 14, 2025

    I followed this recipe exactly. The cupcakes were dense but the lemon flavor was very nice. I didn’t love the frosting – could not taste the blackberry and as others commented the frosting is thin and not a nice typical cream cheese frosting consistency. The color was lovely. Not sure I would make them again.

    Reply
  2. Catherine J Fowler says:
    April 11, 2025

    Could give a measurement for the zest and lemon juice? Sometimes you get tsps from a lemon, sometimes tablespoons depending on size AND thickness of skin.

    Glad I read the comments about the frosting. Helpful.

    These sound really good. And they look like Spring.

    Reply
    1. Trina @ Sally's Baking says:
      April 11, 2025

      Hi Catherine! See recipe Notes for details – Lemons: About 1 and 1/2 Tbsp zest and 1/4—1/3 cup lemon juice.

      Reply
  3. Darla says:
    March 19, 2025

    I want to try this blackberry frosting recipe and I’m wondering if I could use blackberry jam instead of the fresh purée, and if so would I need to make any adjustments to keep the frosting consistency correct.

    Reply
    1. Lexi @ Sally's Baking says:
      March 19, 2025

      Hi Darla, that should work just fine here. If you find the frosting a bit too thick (since the jam is thicker than puree), you can add a splash of milk or cream. Let us know how it goes!

      Reply
  4. Amanda says:
    March 15, 2025

    The recipe was a huge hit!! Sadly my frosting was not very firm and more on the runny side so it did not make the beautiful icing. Any tips would be greatly appreciated.

    Reply
  5. Nicole says:
    February 22, 2025

    this was great – the flavor of the icing was spot on but the texture was a little runny. Do you have any suggestions for making it thicker but keeping the same level of sweetness? Should I cook the blackberries in advance so the puree is less watery?

    Reply
    1. Michelle @ Sally's Baking says:
      February 22, 2025

      Hi Nicole, Are you outside of the US by chance? Cream cheese products vary by region and, unfortunately, cream cheese is much thinner outside of the US and usually results in thin frosting. Chilling the frosting in the refrigerator helps to solidify it so that it spreads much easier and holds its shape on the cupcakes. (That always helps cream cheese frosting!)

      Reply
  6. Adrianna says:
    January 18, 2025

    I’ve made this recipe twice now and everyone who tries it loves it! The best cupcake recipe I’ve ever made! Love the way the sour freshness of the lemon and blackberry balances out the sweet 🙂

    Reply
  7. Lisa says:
    July 3, 2024

    Love this recipe! It is one of my new favs.

    Reply
  8. Jessica says:
    July 2, 2024

    I really want to try this recipe. Can I freeze some of the frosting?

    Reply
    1. Trina @ Sally's Baking says:
      July 2, 2024

      Hi Jessica, you can cover and store this frosting for up to 5 days in the refrigerator or up to 3 months in the freezer. After freezing, thaw in the refrigerator then beat the frosting for a few seconds so it’s creamy again.

      Reply
  9. Amy N says:
    May 10, 2024

    Any advice for getting more blackberry flavor into the frosting? Couldn’t taste it at all!

    Reply
    1. Lexi @ Sally's Baking says:
      May 10, 2024

      Hi Amy, we’d caution against adding more blackberry puree as it could make the frosting too runny. If you can find freeze dried blackberries, you could try using those like we do in strawberry buttercream.

      Reply
  10. Jay v says:
    April 21, 2024

    Cupcakes came out great. Icing was a good consistency and tasted good, but the blackberry acted more as food coloring than a flavor addition. Cream cheese took over the flavor entirely. Overall tasty treat, just don’t expect the blackberry to be particularly notable.

    Reply
  11. Linda Ortolano says:
    April 21, 2024

    I made mini cups with this recipe for a diner I occasionally bake at. These cupcakes had people swooning. I did want to pipe the frosting so I included a little more butter than the recipe requires. After straining the blackberry purée, I cooked it for a few minutes and added a bit of cornstarch slurry to it. I was able to pipe the frosting using a 1M tip. Thanks for yet another great recipe.

    Reply
  12. Barbara Fozard says:
    March 30, 2024

    Loved the fluffy lemon cupcake. Did not like the frosting. Too sweet, too runny. But this could be the baker (me – lol) because my family never likes icing on anything, so I’m not great at making frostings. I love them, but since I’m solo, I just lack experience in making them. My question is: for ALL powdered sugar icings, what can you do to thicken besides to just keep adding more powdered sugar? Then it just gets sweeter and sweeter!

    Reply
    1. Trina @ Sally's Baking says:
      March 30, 2024

      Hi Barbara! Powdered sugar is the thickener for frostings like this one. Make sure to start with full fat brick style cream cheese and proper room temperature butter and cream cheese (not too warm) to prevent the frosting from being too thin or greasy.

      Reply
    2. Talia Seals says:
      April 29, 2025

      If you put it in the fridge it will be perfect

      Reply
  13. Gracelyn says:
    March 13, 2024

    I loved how these cupcakes turned out, except for one thing – my frosting was full of butter clumps, not smooth like the picture. They still tasted great though!

    Reply
    1. Stephanie @ Sally's Baking says:
      March 14, 2024

      Hi Gracelyn, We are glad you enjoyed these! Make sure that your butter and cream cheese for the frosting are at room temperature which helps them to combine much more smoothly.

      Reply
  14. AaSh says:
    August 27, 2023

    I made this recipe for my dad’s bday and the cupcakes were a bit dense. I was wondering why that happened. Also the frosting was a bit runny. Another thing my cupcakes were white not a golden brown. I hope to make these again. Overall my family loved the cupcakes.

    Reply
    1. Beth @ Sally's Baking says:
      August 27, 2023

      Hi Ash, is it possible that your batter was over-mixed? That’s often the culprit for dense cakes and cupcakes. This post on how to prevent dry and dense cakes might also help. I hope the next batch turns out better!

      Reply
  15. Natalia says:
    August 15, 2023

    Great 1st year cupcake for my son. He was so happy with his cupcake. i had a couple questions,
    1. I reduced the sugar of the frostibg to 2 cups instead of 3. I felt it was sweet enough, but I realized the frostibg was a bit runny. I thought it was because of the omitted cup. How can I keek the sugars low and the frosting holding better?
    2. Bater: After I added the dry ingredients, I was not sure what to add next (if the milk or the lemons) and in which order. I added the milk first, then th lemon juice and zest, but can the milk and lemons be added together or will they curd and damage the recipe?
    3. What does count for overmixing in the mixer? More than 2 min after the addition of the milk and lemon?
    4. I froze the leftover frosting, can it be used again?
    I loved this recipe and my son was so happy eating his cupcake. I am looking forward to make this recipe again and again!

    Reply
    1. Lexi @ Sally's Baking says:
      August 15, 2023

      Hi Natalia, we’re so glad the cupcakes were a hit and we’re happy to answer your questions. 1. The confectioners’ sugar not only sweetens the frosting, but it plays an important role in giving the frosting its structure. Reducing the sugar will make the frosting thinner, and unfortunately there aren’t any workarounds for that. For a less sweet frosting, you might enjoy this whipped frosting for your next batch. 2. After adding and incorporating the dry ingredients, you can add the milk, lemon juice, and lemon zest at the same time, and then finish mixing. 3. It’s hard to put an exact time on over mixing (will really depend on each person), but you want to mix until all of the ingredients are just combined. Particularly at the end, you may want to use a whisk to get any of those last few lumps without having to run your mixer. 4. Yes, frosting can be frozen for up to 3 months. Thaw overnight in the refrigerator before enjoying.

      Reply
  16. Stephen Pohlman says:
    April 28, 2023

    Took to a potluck. All gone!

    Reply
  17. Jane says:
    April 23, 2023

    My 10 year old daughter and I love to bake items from your site and books. We have made at least a dozen yummy treats so far and these are our favorite cupcakes! They remind us of the lemon blueberry scones, which is our favorite breakfast. Thank you!

    Reply
  18. Patty says:
    February 18, 2023

    Great recipe! I got 14 cupcakes and leftover icing.

    Reply
  19. Zoe says:
    November 30, 2022

    Hi, I am interested in baking these cupcake however in the UK we often use caster sugar for baking rather than granulated sugar. Will it make a difference if I used caster sugar instead of granulated?

    I was always under the impression that caster sugar is used over granulated sugar as it’s finer. I have always done my baking with caster sugar will this make a difference to your recipe.

    Reply
    1. Stephanie @ Sally's Baking says:
      November 30, 2022

      Hi Zoe, In most cases you should be fine to substitute caster sugar for granulated, and it should be fine here. Let us know if you do give it a try!

      Reply
  20. J Kenney says:
    August 29, 2022

    Using the cream cheese frosting recipe for a cake. If I cook the blackberry juice down a bit will it still work and give me a thicker frosting?

    Reply
    1. Trina @ Sally's Baking says:
      August 29, 2022

      That should work!

      Reply
  21. Alecia says:
    June 19, 2022

    I’ve been making this recipe for years and it’s one of my favorites on SBA! I tested the frosting with blueberries and it worked! I didn’t even strain them after blending- just put a heaping 1/3 c in the food processor and added it into the frosting until it was a desirable consistency. I personally did not use the entire puréed amount.

    Reply
  22. Rebecca says:
    June 16, 2022

    Hi, can I make mini cupcakes with this recipe? Anything to adjust? Thank you! Rebecca

    Reply
    1. Lexi @ Sally's Baking says:
      June 16, 2022

      Hi Rebecca, absolutely! For around 30 mini cupcakes, bake for about 11-13 minutes, same oven temperature.

      Reply
  23. Rachel Marr says:
    June 14, 2022

    Made these for my club’s picnic, and they were very popular. The lemon-blackberry combination is very tasty and visually striking, but for me personally the cream cheese flavour wasn’t quite balanced out well enough. I would probably just use buttercream in the future.

    Instead of fresh lemon for garnish, I candied some lemon zest strips using the Joy of Cooking recipe, them curled them around skewers and dried them in the oven at 175°F for an hour.

    I’m very impressed with the consistency of your recipes and the helpfulness of the variation and troubleshooting tips. Can’t wait to try more!

    Reply
    1. Lexi @ Sally's Baking says:
      June 14, 2022

      Thank you for your kind note, Rachel, and for making and trusting our recipes!

      Reply
    2. Kelley says:
      September 4, 2022

      I agree: the cream cheese took away from the blackberry flavor leaving these tasting like lemon cream cheese cupcakes. And I also agree that the texture was dense like a muffin instead of light like cake. I love the concept and the visual appeal, but tweaks are definitely needed to turn these into bona fide cupcakes that exude the flavors in the title.

      Reply
  24. Emily says:
    June 13, 2022

    I really want to make this recipe but I don’t like cream cheese frosting. Do you have a non cream cheese version?

    Reply
    1. Trina @ Sally's Baking says:
      June 13, 2022

      Hi Emily! We don’t have a recipe for blackberry buttercream without the cream cheese. Curdling is usually an issue from the fresh fruit. If you can find freeze dried blackberries you could use the same method from our strawberry buttercream recipe (or just enjoy strawberry buttercream on these cupcakes!). Let us know what you try 🙂

      Reply
  25. Karla Estelle says:
    April 28, 2022

    Eager to try this, but I was wondering if I can make it in a 9 x13 cake pan instead. Should I double everything? Any idea on baking time? Thanks so much for your awesome recipes!

    Reply
    1. Trina @ Sally's Baking says:
      April 28, 2022

      Hi Karla! For a 9×13 lemon cake, we recommend using the batter from our lemon layer cake (see recipe notes for 9×13 baking instructions). You can use this blackberry cream cheese frosting instead – depending on how much frosting you like you may need to make a larger batch. Enjoy!

      Reply
      1. Karla says:
        April 29, 2022

        Just popped finished cake in the refrigerator. It’s gorgeous, and that is the Best. Frosting. Ever! I ate all of what was left in the bowl. Haven’t done that for decades. Lol
        Thanks again for a wonderful keeper recipe.

  26. Kaylie S says:
    April 28, 2022

    Hi ! I am thinking about using the blackberry cream cheese frosting for a lemon cake rather than cupcakes. Do you think this batch of icing would be enough for layer cakes or should I double it?

    Reply
    1. Lexi @ Sally's Baking says:
      April 28, 2022

      Hi Kaylie, this would be enough frosting for a 3 layer, 6 inch cake. For anything larger, you’ll likely want to double it!

      Reply
  27. Kasia Dabrowski says:
    April 24, 2022

    I made Sally’s Very Vanilla cupcakes ( mini cupcakes) and I was very happy. I loved the texture of them. I’m very inexperienced about the cupcakes. I’m always have a problem. Usually I’m complaining that they are dry or too sweet . So when I found Very Vanilla cupcakes I was in heaven. So dreamy! My question is – can I use cake flour in your Lemon Cupcakes instead of all purpose flour? Do I need any other adjustments? I feel that using of cake flour made my vanilla mini cupcakes so fluffy and beautiful

    Reply
  28. Autumn says:
    April 7, 2022

    Loved the flavor of these cupcakes but I noticed mine were super heavy and dense…any suggestions to make them a little more light and fluffy?

    Reply
    1. Lexi @ Sally's Baking says:
      April 7, 2022

      Hi Autumn, is it possible that your batter was over mixed? That’s often the culprit for dense cakes and cupcakes. This post on how to prevent dry and dense cakes might also help. Glad you enjoyed these!

      Reply
  29. Cornelia says:
    March 29, 2022

    Can lemon extract be used in place of the zest and juice? If so how much would be needed? Thanks I’m advance!!

    Reply
    1. Sally @ Sally's Baking says:
      April 2, 2022

      Hi Cornelia, absolutely but there are some other changes required. Though I haven’t tested this, I would replace the lemon juice with milk (use 1/4 cup (60ml)) and leave out the lemon zest. Then add 1 and 1/2 teaspoons lemon extract when you add the vanilla extract.

      Reply
  30. Rita says:
    March 25, 2022

    Made these today and was not crazy about the texture . The cupcake was almost spongy and heavy? I prefer a light cupcake, or dense and very moist. I noticed the same thing when I made Sally’s funfetti cake.

    I measured everything with my kitchen scale and bake quite often, so I’d like to think it’s not so much of a user error but personal preference. While I appreciate all the work Sally does to give us free recipes, I think I will stick to her other treats / frosting recipes, and source the cake part elsewhere.

    Reply